I used to charge my phone (Moto G3) connecting it to my laptop. It was working fine until I installed an elementary base update last week. My phone no longer gets charged. I thought it was a problem with my cable or USB port(s) or even the phone's port. But it works fine when using a regular charger, or while booted in to windows in the same machine.
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elementary OS charges my Nexus 9 (though very slowly which is normal for my device when charging from laptop). It even charges it before elementary OS has booted – Suici Doga Apr 9 '16 at 13:56
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I do not think that this is related to elementary since your phone is charged by USB power which I think elementary OS cannot control – Suici Doga Apr 10 '16 at 4:37